Information for 10-AACTAATTTT (Motif 15)

C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T
Reverse Opposite:
T G C A C G T A T C G A C G T A A C G T A C G T C T G A A C T G A C G T G A C T
p-value:1e-7
log p-value:-1.810e+01
Information Content per bp:1.815
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif185.6
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets50.8 +/- 25.3bp
Average Position of motif in Background49.2 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0028.1_En1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AACTAATTTT---
GCGAACTAATTAATGC
 A C G T A C G T A C G T C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AACTAATTTT
GATTAATTAATTT-
 A C G T A C G T A C G T A C G T C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AACTAATTTT
-AATAATT--
 C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

PH0092.1_Lhx2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AACTAATTTT-----
TAAACTAATTAGTGAAC
 A C G T A C G T C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AACTAATTTT
GTTAACTAGN---
 A C G T A C G T A C G T C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AACTAATTTT
--CTAATTAG
 C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T
A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

VSX1/MA0725.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AACTAATTTT
--CTAATTAT
 C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T
A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T

PH0108.1_Msx3/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AACTAATTTT---
CAAAACCAATTAATTT
 A C G T A C G T A C G T C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AACTAATTTT-
-NNTAATTANN
 C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T A C G T
A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AACTAATTTT-
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A G T A C A G C T T G C A T G C A C G A T A C G T C G A T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C