Information for 6-AGTAAAGGTAGAT (Motif 14)

C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T
Reverse Opposite:
G T C A C G A T A G T C A C G T C T G A A G T C G T A C A C G T A C G T A C G T C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 30.9bp
Average Position of motif in Background60.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAAGGTAGAT
ANGNAAAGGTCA--
 A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTAAAGGTAGAT-
NNTATTACATGTANNNT
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTAAAGGTAGAT--
AAAATACATGTAAAAAT
 A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTAAAGGTAGAT
GAAAGTGAAAGT----
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTAAAGGTAGAT-
ANTATTACATGTANNNN
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGTAAAGGTAGAT
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTAAAGGTAGAT--
TAAATACATGTAAAATT
 A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTAAAGGTAGAT
GCTAAACGGT---
 C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTAAAGGTAGAT
ATTAAA-------
 C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTAAAGGTAGAT
NGYCATAAAWCH----
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A C T G A C T G A G C T C G T A T A C G C G T A A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T