Information for 5-AATATAATTTTCT (Motif 13)

G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A C G T A G T C A C G T A A C G T A C G T C G T A C G A T C G T A A C G T A C G T
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.890
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.8 +/- 20.2bp
Average Position of motif in Background51.8 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AATATAATTTTCT
TATAATTATAATATTC-
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AATATAATTTTCT
NNTAATTATAATTNNN-
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AATATAATTTTCT-
GAACADWATGTTCTT
 A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AATATAATTTTCT
TTTAATTATAATTAAG-
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AATATAATTTTCT
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATATAATTTTCT
AAGATATCCTT----
 A C G T A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AATATAATTTTCT
TAATTTAATTA---
 A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AATATAATTTTCT---
AANTTATTGTTCTNNA
 G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AATATAATTTTCT
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AATATAATTTTCT
TAATTTAATTA---
 A C G T G T C A C G T A A C G T C G T A A C G T G T C A G T C A A C G T A C G T A C G T A C G T A T G C A C G T
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T