Information for 4-CCCTGCCTGTAAATCC (Motif 18)

A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G C T A C G T C G A T C G T A A G T C C G T A A C T G A C T G A G T C G T C A A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.397e+01
Information Content per bp:1.895
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 29.8bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCCTGCCTGTAAATCC
----GSCTGTCACTCA
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCTGCCTGTAAATCC-
----GGCCATAAATCAC
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCCTGTAAATCC
NNACTTGCCTT-------
 A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCCTGCCTGTAAATCC--
---TGCCTGCGYCMCCTT
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCCTGCCTGTAAATCC
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCCTGCCTGTAAATCC-
-----NCTGTCAATCAN
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCCTGCCTGTAAATCC
----GGCCATAAATCA
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCCTGCCTGTAAATCC
----GGCCATAAATCA
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCCTGCCTGTAAATCC
-----GCTGTCAA---
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCCTGCCTGTAAATCC
CACTTCCTGT------
 A G T C A G T C G T A C A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A G T C A C T G A C G A T A G T C A G T C
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T