Information for 12-GGCCTATACGACC (Motif 17)

C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A C T G G A C T C T G A A G C T C G T A A C T G A C T G A G T C G A T C
p-value:1e-6
log p-value:-1.397e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 25.6bp
Average Position of motif in Background69.0 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTATACGACC---
NNNATTTTACGACNNTN
 A C G T C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTATACGACC---
ANNATTTTACGACNTNA
 A C G T C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCTATACGACC
AGGCCTAG------
 A C G T C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCCTATACGACC
--NTTTTACGACC
 C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCCTATACGACC-----
-AAGCATACGCCCAACTT
 C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCCTATACGACC
--NTTTTACGACC
 C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C
A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTATACGACC---
GNNNTTTTACGACCTNA
 A C G T C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCCTATACGACC---
ANNTTTTACGACNTNN
 C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTATACGACC
CNAGGCCT--------
 A C G T A C G T A C G T C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCCTATACGACC
-ANTTTTACGACC
 C A T G A C T G A G T C A G T C A C G T C T G A A G C T C G T A A G T C A C T G G T C A A G T C A G T C
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C