Information for 4-ACAAAGGCASAGTGTG (Motif 9)

C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
Reverse Opposite:
T A G C C G T A A G T C G C T A A G T C C G A T A T C G C G A T A C T G A G T C A T G C A G C T A G C T A C G T T C A G C G A T
p-value:1e-12
log p-value:-2.824e+01
Information Content per bp:1.716
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.1 +/- 19.1bp
Average Position of motif in Background49.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGCASAGTGTG
AACAAAGG---------
 A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAAAGGCASAGTGTG
ACAAAG----------
 C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGCASAGTGTG
VRRACAAWGG---------
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGCASAGTGTG
AAAACAAAGG---------
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGCASAGTGTG
RACAAWGG---------
 A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGCASAGTGTG
GGAACAAAGR---------
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGGCASAGTGTG
AGAAGAACAAAGGACTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGGCASAGTGTG
AAACAGACAAAGGAAT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGGCASAGTGTG
ATAAGAACAAAGGACTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAAAGGCASAGTGTG
AGAAAGTGAAAGTGA-
 C G T A A G T C C G T A C T G A C T G A A T C G A C T G G T A C C G T A A T G C C G T A T C A G C A G T A C T G G C A T A T C G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T