Information for 23-GGGAAGAACAATA (Motif 26)

A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 29.4bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGGAAGAACAATA----
-TTAAGAACAATAAATT
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGGAAGAACAATA----
-TTTAGAACAATAAAAT
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGAAGAACAATA--------
AATAAAGAACAATAGAATTTCA
 A C G T A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGGAAGAACAATA-
NTTNAGAACAATTA
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGAAGAACAATA-----
-TNNAGAACAATANATNN
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGGAAGAACAATA-----
-TAGTGAACAATAGATTT
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGAAGAACAATA----
NNNNNGAACAATTGANN
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGAAGAACAATA-----
--AATGAACAATGGAATT
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGAAGAACAATA----
TCACGGAACAATAGGTG
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GGGAAGAACAATA-
-----GAACAATGG
 A C T G A C T G A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G