Information for 18-ACAAAGBAGGCTT (Motif 19)

C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A T G C A G T C A C G T T A G C A G T C A C G T A G C T A C G T C T A G A C G T
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.843
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets36.9 +/- 22.5bp
Average Position of motif in Background53.9 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACAAAGBAGGCTT
ACAAAGGNBCCT-
 C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGBAGGCTT
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACAAAGBAGGCTT
ACAAAG-------
 C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGBAGGCTT
AAAACAAAGG------
 A C G T A C G T A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGBAGGCTT
VRRACAAWGG------
 A C G T A C G T A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGBAGGCTT
GGAACAAAGR------
 A C G T A C G T A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGBAGGCTT
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGBAGGCTT
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGBAGGCTT
AACAAAGG------
 A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGBAGGCTT
RACAAWGG------
 A C G T C G T A A G T C G T C A C T G A C G T A A C T G A C T G C G T A C T A G A T C G T G A C A C G T A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T