Information for 13-GAAGCCACTGGAC (Motif 13)

C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C G T A C C G T A A C T G A C G T C A T G A C T G A G T C A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.924
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.8 +/- 17.1bp
Average Position of motif in Background52.1 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAAGCCACTGGAC---
TAAGCCACTTGAAATT
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAGCCACTGGAC---
TAAGCCACTTGAAATT
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAGCCACTGGAC---
TAAGCCACTTAACATT
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAGCCACTGGAC---
TAAGCCACTTGAATTT
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCACTGGAC
NGAAGC--------
 A C G T C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAGCCACTGGAC----
ATAACCACTTGAAAATT
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGCCACTGGAC----
AATCGCACTGCATTCCG
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAGCCACTGGAC
-AAACCACAGAN-
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAGCCACTGGAC--
-TCACCTCTGGGCAG
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAGCCACTGGAC-------
GAAGTANCACGAATNMRAGT
 C T A G C G T A C G T A A C T G A G T C G A T C C G T A G T A C C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T