Information for 8-ACTCATGAAA (Motif 39)

C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T
p-value:1e-5
log p-value:-1.225e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 33.4bp
Average Position of motif in Background48.2 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACTCATGAAA
NCYAATAAAA
 C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACTCATGAAA--
ACATTCATGACACG
 A C G T A C G T C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACTCATGAAA
CCYMATAAAA
 C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACTCATGAAA---
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACTCATGAAA-
GCTCGTAAAAA
 C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACTCATGAAA-
-GTCGTAAAAT
 C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACTCATGAAA---
AAACCTCGTAAAATTT
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACTCATGAAA-
-CCAATAAAAA
 C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACTCATGAAA-
-ATGATGCAAT
 C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACTCATGAAA-
-MTGATGCAAT
 C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T