Information for 6-WWGCTAGSRAACC (Motif 9)

C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A G C T A T G C A G T C A G C T C G T A A C T G A G T C C G T A C G T A
p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 20.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--WWGCTAGSRAACC
KGTTGCTAGGMAACA
 A C G T A C G T C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-WWGCTAGSRAACC---
ANNNCTAGTTAACNGNN
 A C G T C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------WWGCTAGSRAACC--
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:WWGCTAGSRAACC
CTTCTGGGAAA--
 C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---WWGCTAGSRAACC
NGCTTTCTAGGAAN--
 A C G T A C G T A C G T C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----WWGCTAGSRAACC
NNCGTTGCTATGGNN--
 A C G T A C G T A C G T A C G T C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:WWGCTAGSRAACC
TTTCCAGGAAA--
 C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:WWGCTAGSRAACC-
TTTCCAGGAAATGG
 C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:WWGCTAGSRAACC
-GGTTAGAGACCT
 C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:WWGCTAGSRAACC
-TTCTTGGAAAN-
 C G A T C G A T A C T G A G T C A C G T C T G A A C T G A T C G T C G A C G T A C G T A A G T C A G T C
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T