Information for 5-TGATTGGCCG (Motif 6)

A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G
Reverse Opposite:
G T A C A C T G A C T G A T G C T A G C C G T A G T C A A C G T A T G C T G C A
p-value:1e-15
log p-value:-3.483e+01
Information Content per bp:1.717
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif537.6
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets56.4 +/- 25.3bp
Average Position of motif in Background48.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGCCG
TTGATTGN---
 A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGATTGGCCG--
TGATTGGCTANN
 A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGCCG
CCGATTGGCT-
 A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGCCG----
CTGATTGGTCNATTT
 A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGCCG-
BTGABTGACAGS
 A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGCCG-
NTGATTGACAGN
 A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------TGATTGGCCG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TGATTGGCCG
CNGTGATTTN---
 A C G T A C G T A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGATTGGCCG--
TGAGTGACAGSC
 A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TGATTGGCCG-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C G T A C G T A T C G T A C G G T A C T G A C C A T G A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G