Information for 15-KCCVTCTGGGCCC (Motif 24)

A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
Reverse Opposite:
T C A G T C A G A T C G T A G C G A T C G A T C T C G A T A C G G T C A A T G C A C T G A T C G T G A C
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.597
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 31.0bp
Average Position of motif in Background42.7 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KCCVTCTGGGCCC
TGCCCTGAGGGCA-
 A C G T A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KCCVTCTGGGCCC
TGCCCTGAGGGCA-
 A C G T A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KCCVTCTGGGCCC
TGCCCTNAGGGCA-
 A C G T A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:KCCVTCTGGGCCC-
CCCCCTTGGGCCCC
 A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:KCCVTCTGGGCCC--
-----GTGGGCCCCA
 A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:KCCVTCTGGGCCC
-----CTAGGCCT
 A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----KCCVTCTGGGCCC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KCCVTCTGGGCCC
-CCTGCTGAGH--
 A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----KCCVTCTGGGCCC
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--KCCVTCTGGGCCC
NNTCCTGCTGTGNNN
 A C G T A C G T A C T G A T G C T G A C T A C G C A G T A T G C A G C T C T A G C T A G A T C G A T G C A G T C A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C