Information for 5-AGCCAAAAGCAGCCAC (Motif 10)

C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
Reverse Opposite:
C T A G A C G T A C T G A T C G A G T C C G A T A C T G A T G C A G C T A C G T A C G T A C G T A C T G A T C G A G T C A G C T
p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.5 +/- 21.0bp
Average Position of motif in Background30.7 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCCAAAAGCAGCCAC
TGCCAA----------
 C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCCAAAAGCAGCCAC
CGTGCCAAG---------
 A C G T A C G T C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGCCAAAAGCAGCCAC
-GCTAAAAATAGC---
 C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCCAAAAGCAGCCAC-----
-CCCCAAACCACCCCCCCCCA
 C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGCCAAAAGCAGCCAC
AGCCTCAGGCA-----
 C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGCCAAAAGCAGCCAC
-KCCAAAAATAGC---
 C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCCAAAAGCAGCCAC
TGCCAAAATAAACANN
 C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGCCAAAAGCAGCCAC
ATGCTAAAAATAGAA--
 A C G T C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAAAAGCAGCCAC---
TGGCCACCAGGTGGCACTNT
 A C G T C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGCCAAAAGCAGCCAC
AGCCTCAGGCA-----
 C T G A A C T G A T G C A G T C C G T A C G T A C G T A T C G A T A C G A G T C C G T A A C T G A T G C A G T C G T C A A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T