Information for 24-GCTTGAGGTA (Motif 43)

A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T A G T C C G T A C G T A A C T G A G T C
p-value:1e-1
log p-value:-3.251e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.5 +/- 25.7bp
Average Position of motif in Background68.5 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGAGGTA
NGCCTGAGGCN
 A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTTGAGGTA-
--TTGCGGTTT
 A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTTGAGGTA
---TGACGT-
 A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGAGGTA
NGCCTNAGGCN
 A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGAGGTA
TGCCTGAGGCN
 A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTTGAGGTA-
-TTTGCGGTTT
 A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTTGAGGTA
--ATGACGTA
 A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTTGAGGTA--
NNHTGTGGTTWN
 A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCTTGAGGTA--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCTTGAGGTA-----
----CAGGTAAGTAT
 A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T