Information for 25-GGATTACTAGCGG (Motif 42)

C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
Reverse Opposite:
A G T C G T A C T A C G A G T C A C G T C T G A C A T G A C G T C T G A G C T A A C G T A G T C G A T C
p-value:1e-3
log p-value:-8.557e+00
Information Content per bp:1.702
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 25.7bp
Average Position of motif in Background28.6 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1/MA0682.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAGCGG
GGGATTAA------
 A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAGCGG
NGGATTAA------
 A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAGCGG
GGGATTANN-----
 A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACTAGCGG
NGGGATTA-------
 A C G T A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAGCGG
CGGATTAN------
 A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGATTACTAGCGG
RGGATTAR------
 A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACTAGCGG
VRGGATTARN-----
 A C G T A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATTACTAGCGG
GGATTAGC-----
 C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACTAGCGG
NNGGATTAGN-----
 A C G T A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAGCGG
NGGATTAN------
 A C G T C A T G T A C G C G T A C A G T A G C T G T C A G T A C G A C T C G T A C T A G A T G C C A T G C T A G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T