Information for 3-ATTVGTATTC (Motif 4)

G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G G T C A G T C A A C G T C T G A T G A C A T G C T C G A C G T A A C G T
p-value:1e-21
log p-value:-4.962e+01
Information Content per bp:1.772
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif68.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets55.0 +/- 23.7bp
Average Position of motif in Background47.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTVGTATTC----
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTVGTATTC
CTCATTTGCATW-
 A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTVGTATTC
ATGAATATTC
 G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTVGTATTC
BTVATTWGCATA-
 A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTVGTATTC--
CTCATGAATATTCAT
 A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTVGTATTC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTVGTATTC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTVGTATTC--
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTVGTATTC--
NNTAATTATAATTNNN
 A C G T A C G T A C G T A C G T G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATTVGTATTC
ATTTGCATA-
 G T C A A C G T A G C T T A C G A C T G G A C T C G T A A C G T A C G T A G T C
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T