Information for 20-AGGTCTCAGT (Motif 39)

C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
Reverse Opposite:
C T G A G T A C A G C T A C T G G T C A T C A G T G C A G T A C A G T C C G A T
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.688
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif858.4
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets46.1 +/- 21.1bp
Average Position of motif in Background50.2 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGGTCTCAGT---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGTCTCAGT
AAGGTCAC---
 A C G T C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTCTCAGT
AGGTGTCA--
 C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGTCTCAGT
TGGTTTCAGT
 C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCTCAGT---
CAGGCCNNGGCCNN
 A C G T C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGTCTCAGT
CNAGGCCT----
 A C G T A C G T C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCTCAGT
TCAAGGTCAN---
 A C G T A C G T A C G T C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGTCTCAGT
AGGTGTGA--
 C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGTCTCAGT
AGGTGTGA--
 C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGTCTCAGT
AGGTGTGA--
 C G T A T C A G C A T G A C G T A G T C C A G T T G A C T C G A A C T G G A C T
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T