Information for 19-CTACGCACAC (Motif 38)

A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C
Reverse Opposite:
A T C G A G C T A T C G A C G T A C T G A G T C T A C G A G C T C T G A A C T G
p-value:1e-7
log p-value:-1.821e+01
Information Content per bp:1.841
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif95.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets56.4 +/- 27.6bp
Average Position of motif in Background57.5 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTACGCACAC------
CGAAGCACACAAAATA
 A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTACGCACAC------
AGCGGCACACACGCAA
 A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTACGCACAC-
GCTCCGCCCMCY
 A C G T A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTACGCACAC-----
NNTTTGCACACGGCCC
 A C G T A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTACGCACAC-
GCCACRCCCACY
 A C G T A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTACGCACAC-
GCCACGCCCACT
 A C G T A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTACGCACAC
CCAGGAACAG
 A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

EGR4/MA0733.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTACGCACAC------
TTACGCCCACGCATTT
 A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTACGCACAC--
GGCCACGCCCCCTT
 A C G T A C G T A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTACGCACAC---
-YCCGCCCACGCN
 A G T C A G C T T C G A A T G C T C A G A G T C C G T A A T G C C T G A A T G C A C G T A C G T A C G T
A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A