Information for 21-AGGGCTCCATGGC (Motif 33)

G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G C T A C T G A C T G G T C A A C T G A G T C A G T C A T G C A C G T
p-value:1e-8
log p-value:-1.898e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.6 +/- 19.4bp
Average Position of motif in Background43.9 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGGGCTCCATGGC-
--GGCTCYAKCAYC
 G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGGCTCCATGGC--
-NGTTGCCATGGCAA
 G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C A C G T A C G T
A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGGGCTCCATGGC---
--GTTGCCATGGCAAC
 G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGGCTCCATGGC
---GCTCCG----
 G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTCCATGGC-
NAGGTCACNNTGACC
 A C G T G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGGCTCCATGGC--
-GGTTGCCATGGCAA
 G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C A C G T A C G T
A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGGCTCCATGGC---
-KGTTGCCATGGCAAC
 G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGGGCTCCATGGC
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGGCTCCATGGC--
AGGTCACCCTGACCT
 G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGGGCTCCATGGC
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A G T C A C G T A G T C A G T C C T G A A C G T A C T G C T A G A G T C
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A