Information for 16-GGCGATTGAA (Motif 30)

A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A G T C A A C G T G T A C A C T G A T G C A G T C
p-value:1e-9
log p-value:-2.073e+01
Information Content per bp:1.867
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.4 +/- 26.2bp
Average Position of motif in Background55.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGCGATTGAA----
NNANTGATTGATNNNN
 A C G T A C G T A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCGATTGAA----
NNANTGATTGATNTTN
 A C G T A C G T A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCGATTGAA---
-GGGATTGCATNN
 A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCGATTGAA---
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCGATTGAA----
----ATTGATTYND
 A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGCGATTGAA---
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCGATTGAA----
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0056.1_Hoxa9/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCGATTGAA-----
ACGGCCATAAAATTAAT
 A C G T A C G T A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCGATTGAA
----ATTAAA
 A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCGATTGAA
CNGTGATTTN-
 A C G T A C T G A T C G T G A C A C T G C G T A A C G T C G A T A C T G C G T A C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T