Information for 15-CWAKRAGCARAGG (Motif 21)

A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G C T A C G T A C T G G T A C A C G T A G C T G T A C G C A T C G A T A C T G
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.5 +/- 22.9bp
Average Position of motif in Background56.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CWAKRAGCARAGG
-AAAGATCAAAGG
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

LEF1/MA0768.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CWAKRAGCARAGG---
-AAAGATCAAAGGGTT
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CWAKRAGCARAGG----
NANAGATCAAAGGGNNN
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CWAKRAGCARAGG
---GGAACAAAGR
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CWAKRAGCARAGG----
NNNAGATCAAAGGANNN
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CWAKRAGCARAGG----
ATAAGAACAAAGGACTA
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CWAKRAGCARAGG
---AAAACAAAGG
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWAKRAGCARAGG
-----AACAAAGG
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CWAKRAGCARAGG----
AGAAGAACAAAGGACTA
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CWAKRAGCARAGG---
--TGGGGCAAAGGTCA
 A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A