p-value: | 1e-489 |
log p-value: | -1.127e+03 |
Information Content per bp: | 1.725 |
Number of Target Sequences with motif | 138.0 |
Percentage of Target Sequences with motif | 19.86% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 50.9 +/- 11.8bp |
Average Position of motif in Background | 38.0 +/- 1.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.99 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGMATWATKCATGWN ATGAATWATTCATGA- |
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OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 2 |
Score: | 0.98 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGMATWATKCATGWN ATGCATWATGCATRW- |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 3 |
Score: | 0.93 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGMATWATKCATGWN -TGAATTATGCAT--- |
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POU4F1/MA0790.1/Jaspar
Match Rank: | 4 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGMATWATKCATGWN ATGAATAATTAATG-- |
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POU4F3/MA0791.1/Jaspar
Match Rank: | 5 |
Score: | 0.87 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGMATWATKCATGWN ATGCATAATTAATGAG |
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POU4F2/MA0683.1/Jaspar
Match Rank: | 6 |
Score: | 0.80 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGMATWATKCATGWN ATGCATAATTAATGAG |
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PH0148.1_Pou3f3/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGMATWATKCATGWN-- -TNNATTATGCATANNTT |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ATGMATWATKCATGWN ---GAATATTCAT--- |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGMATWATKCATGWN ATGMATATDC------ |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ATGMATWATKCATGWN ----ATGATKGATGRC |
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