Information for 20-GGATTACTAG (Motif 35)

A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C G T A G T C A G T C
p-value:1e-1
log p-value:-4.089e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 32.4bp
Average Position of motif in Background65.6 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACTAG
NGGGATTA----
 A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAG
GGGATTAA---
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAG
CGGATTAN---
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGATTACTAG--
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAG
GGGATTANN--
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGATTACTAG
RGGATTAR---
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTAG
NGGATTAA---
 A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GGATTACTAG--
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GGATTACTAG--
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACTAG
NNGGATTAGN--
 A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T C G T A A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T