p-value: | 1e-9 |
log p-value: | -2.127e+01 |
Information Content per bp: | 1.854 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.54% |
Number of Background Sequences with motif | 45.2 |
Percentage of Background Sequences with motif | 0.11% |
Average Position of motif in Targets | 55.2 +/- 23.4bp |
Average Position of motif in Background | 52.0 +/- 35.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.86 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCTAGGTCA AAYTAGGTCA |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 2 |
Score: | 0.84 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACCTAGGTCA- TATAAGTAGGTCAA |
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RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.82 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCTAGGTCA ATCAAGGTCA |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCTAGGTCA- -TCAAGGTCAN |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.76 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ACCTAGGTCA ----AGGTCA |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 6 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACCTAGGTCA- -TCAAGGTCAT |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 7 |
Score: | 0.73 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACCTAGGTCA-- --CAAGGHCANV |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 8 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACCTAGGTCA-- -TCAAGGTCATA |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCTAGGTCA----- TATTCAAGGTCATGCGA |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACCTAGGTCA- -CAAAGGTCAG |
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