Information for 7-AAGGTCAAGG (Motif 20)

C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.914
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif53.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets57.6 +/- 26.5bp
Average Position of motif in Background48.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:AAGGTCAAGG---
-AGGTCAAGGTCA
 C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:forward strand
Alignment:AAGGTCAAGG---
-AGGTCAAGGTCA
 C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G A C G T A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAGG
TCAAGGTCAT--
 A C G T A C G T C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTCAAGG
TCAAGGTCAN--
 A C G T A C G T C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAAGG-
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAGGTCAAGG
AAGGTCAC--
 C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAGG-
CAAAGGTCAAGGG
 A C G T A C G T C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCAAGG-
AAAGATCAAAGG
 A C G T C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAGGTCAAGG-----
AAGTTCAAGGTCAGC
 C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAAGG--
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T A G A C G T G T A C G T C A C G T A C T A G A C T G A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A