p-value: | 1e-248 |
log p-value: | -5.730e+02 |
Information Content per bp: | 1.747 |
Number of Target Sequences with motif | 83.0 |
Percentage of Target Sequences with motif | 11.61% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 50.0 +/- 12.9bp |
Average Position of motif in Background | 36.1 +/- 12.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.99 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGAATWATTCATGR -ATGAATWATTCATGA |
|
|
|
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 2 |
Score: | 0.96 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGAATWATTCATGR -ATGCATWATGCATRW |
|
|
|
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 3 |
Score: | 0.93 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATGAATWATTCATGR --TGAATTATGCAT-- |
|
|
|
POU4F1/MA0790.1/Jaspar
Match Rank: | 4 |
Score: | 0.87 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGAATWATTCATGR -ATGAATAATTAATG- |
|
|
|
POU4F3/MA0791.1/Jaspar
Match Rank: | 5 |
Score: | 0.85 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGAATWATTCATGR- -ATGCATAATTAATGAG |
|
|
|
POU4F2/MA0683.1/Jaspar
Match Rank: | 6 |
Score: | 0.78 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGAATWATTCATGR- -ATGCATAATTAATGAG |
|
|
|
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 7 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGAATWATTCATGR -ATGAATATTC----- |
|
|
|
PH0148.1_Pou3f3/Jaspar
Match Rank: | 8 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATGAATWATTCATGR--- --TNNATTATGCATANNTT |
|
|
|
MF0010.1_Homeobox_class/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CATGAATWATTCATGR ----AATTATT----- |
|
|
|
PB0178.1_Sox8_2/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CATGAATWATTCATGR NNTNTCATGAATGT------- |
|
|
|