Information for 9-CCTGTAGTCCCTG (Motif 18)

A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G T A C G A C T G G T C A A G T C A C G T C T G A G T A C C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 27.1bp
Average Position of motif in Background46.3 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCTGTAGTCCCTG
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTGTAGTCCCTG
GCTGTG-------
 A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTAGTCCCTG
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTAGTCCCTG
TGCCTGCGYCMCCTT
 A C G T A C G T A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTAGTCCCTG
NCACCTGTN-------
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CCTGTAGTCCCTG
-CTGTGGTTTN--
 A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CCTGTAGTCCCTG
GCTGTGGTTT---
 A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CCTGTAGTCCCTG
AACCGGAAGT-----
 A C G T A C G T A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTAGTCCCTG
ANCCACCTGTTGCNC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CCTGTAGTCCCTG
ACCGGAAGTG----
 A C G T A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C G T A G T C A G T C A T G C A C G T A C T G
C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T