p-value: | 1e-11 |
log p-value: | -2.681e+01 |
Information Content per bp: | 1.715 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.40% |
Number of Background Sequences with motif | 19.1 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 44.2 +/- 21.3bp |
Average Position of motif in Background | 41.6 +/- 28.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.30 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG -----TRAGGTCA--- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG -------AGGTCA--- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG ------AAGGTCAC-- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG -----AGRGGTCA--- |
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CRE(bZIP)/Promoter/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGTGCTGAGGTCCCMG ----GTGACGTCACCG |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG- ----CAAAGGTCAAGGG |
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ESR2/MA0258.2/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG------ -------AGGTCACCCTGACCT |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGTGCTGAGGTCCCMG-- -NTNNNGGGGTCANGNNN |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG ----CAAAGGTCAG-- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGTGCTGAGGTCCCMG- -TCTCAAAGGTCACCTG |
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