Information for 18-TTAAGCAAGCACA (Motif 29)

A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 19.6bp
Average Position of motif in Background75.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTAAGCAAGCACA-
----CCAGGAACAG
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTAAGCAAGCACA
RTTATGYAAB----
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTAAGCAAGCACA
-WAAGTAAAYA--
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTAAGCAAGCACA
-AAAGTAAACA--
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTAAGCAAGCACA
-AAAGTAAACA--
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAAGCAAGCACA
TTATGCAAT----
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTAAGCAAGCACA-------
----CGAAGCACACAAAATA
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

CEBPB/MA0466.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTAAGCAAGCACA
ATTGCGCAAT----
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T A C G T A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTAAGCAAGCACA
ATTGCGCAAT----
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T A C G T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTAAGCAAGCACA
ATTGCGCAAT----
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C C G T A A G T C C G T A
T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T A C G T A C G T