Information for 12-CGGGAGCCAGGAGBGH (Motif 21)

G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
Reverse Opposite:
C G T A A G T C T C A G A T G C A C G T A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C G T A C A T G C C A T G
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.6 +/- 28.7bp
Average Position of motif in Background23.7 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGGAGCCAGGAGBGH
AGCGCGCC--------
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCCAGGAGBGH
-CGGAGC---------
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CGGGAGCCAGGAGBGH
-------CAGGTGAGG
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGGAGCCAGGAGBGH
--CGTGCCAAG-----
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGGGAGCCAGGAGBGH
------CCWGGAATGY
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CGGGAGCCAGGAGBGH
-----NNCAGGTGCG-
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGGGAGCCAGGAGBGH
----TGCCAA------
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGGGAGCCAGGAGBGH-
----TGCCCNNAGGGCA
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGGGAGCCAGGAGBGH-
----TGCCCTNAGGGCA
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGGGAGCCAGGAGBGH
-----NNCAGGTGNN-
 G T A C T A C G A C T G T C A G G T C A A C T G A G T C A G T C G T C A A C T G A C T G G T C A A T C G A G T C A C T G G A C T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T