Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 703)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46617)	% of Background Sequences with Motif
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-783	-1.804e+03	0.0000	534.0	75.96%	778.5	1.67%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-781	-1.799e+03	0.0000	373.0	53.06%	103.4	0.22%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-764	-1.759e+03	0.0000	407.0	57.89%	193.0	0.41%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-764	-1.759e+03	0.0000	407.0	57.89%	193.0	0.41%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-76	-1.750e+02	0.0000	78.0	11.10%	231.8	0.50%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-51	-1.193e+02	0.0000	32.0	4.55%	22.0	0.05%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-28	-6.512e+01	0.0000	85.0	12.09%	1304.3	2.80%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-23	-5.472e+01	0.0000	73.0	10.38%	1142.8	2.45%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-23	-5.463e+01	0.0000	79.0	11.24%	1332.5	2.86%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-21	-4.997e+01	0.0000	68.0	9.67%	1084.7	2.33%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-21	-4.935e+01	0.0000	82.0	11.66%	1557.1	3.34%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-19	-4.536e+01	0.0000	60.0	8.53%	932.2	2.00%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-12	-2.944e+01	0.0000	32.0	4.55%	414.1	0.89%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-12	-2.899e+01	0.0000	40.0	5.69%	654.8	1.41%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-12	-2.872e+01	0.0000	33.0	4.69%	453.7	0.97%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e-12	-2.826e+01	0.0000	106.0	15.08%	3340.5	7.17%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-6	-1.429e+01	0.0000	53.0	7.54%	1680.9	3.61%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-5	-1.356e+01	0.0000	57.0	8.11%	1910.8	4.10%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-4	-9.911e+00	0.0010	23.0	3.27%	590.7	1.27%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-4	-9.754e+00	0.0011	19.0	2.70%	439.3	0.94%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-3	-9.047e+00	0.0020	40.0	5.69%	1396.3	3.00%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-3	-8.804e+00	0.0025	8.0	1.14%	98.3	0.21%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-3	-8.695e+00	0.0026	41.0	5.83%	1469.7	3.15%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-3	-8.635e+00	0.0027	34.0	4.84%	1138.3	2.44%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-3	-8.217e+00	0.0039	52.0	7.40%	2060.5	4.42%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-3	-7.186e+00	0.0106	19.0	2.70%	541.6	1.16%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-3	-7.174e+00	0.0106	95.0	13.51%	4536.3	9.74%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-3	-7.165e+00	0.0106	49.0	6.97%	2001.7	4.30%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-3	-7.049e+00	0.0109	24.0	3.41%	770.4	1.65%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-2	-6.750e+00	0.0142	41.0	5.83%	1624.0	3.49%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-2	-6.678e+00	0.0148	37.0	5.26%	1426.9	3.06%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-2	-6.570e+00	0.0159	22.0	3.13%	706.3	1.52%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-2	-6.483e+00	0.0169	45.0	6.40%	1857.6	3.99%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-2	-6.361e+00	0.0185	56.0	7.97%	2459.3	5.28%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-2	-6.274e+00	0.0196	14.0	1.99%	371.9	0.80%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-2	-6.127e+00	0.0221	6.0	0.85%	86.9	0.19%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-2	-6.054e+00	0.0231	80.0	11.38%	3841.6	8.25%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-2	-6.045e+00	0.0231	73.0	10.38%	3444.8	7.39%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-2	-5.936e+00	0.0247	44.0	6.26%	1859.2	3.99%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-2	-5.471e+00	0.0383	51.0	7.25%	2290.5	4.92%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-2	-5.366e+00	0.0415	32.0	4.55%	1284.4	2.76%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-2	-5.307e+00	0.0429	22.0	3.13%	786.7	1.69%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e-2	-5.223e+00	0.0456	13.0	1.85%	376.0	0.81%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-2	-5.014e+00	0.0550	39.0	5.55%	1689.4	3.63%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-2	-4.890e+00	0.0608	79.0	11.24%	3967.4	8.52%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-2	-4.699e+00	0.0721	16.0	2.28%	539.3	1.16%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-2	-4.697e+00	0.0721	5.0	0.71%	83.8	0.18%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-2	-4.683e+00	0.0721	137.0	19.49%	7493.9	16.09%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-4.508e+00	0.0818	9.0	1.28%	237.3	0.51%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-4.508e+00	0.0818	89.0	12.66%	4626.2	9.93%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-1	-4.456e+00	0.0828	27.0	3.84%	1108.6	2.38%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-4.326e+00	0.0925	55.0	7.82%	2669.1	5.73%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-4.025e+00	0.1227	13.0	1.85%	439.1	0.94%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-1	-3.802e+00	0.1505	44.0	6.26%	2119.6	4.55%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-3.710e+00	0.1620	13.0	1.85%	459.5	0.99%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-1	-3.708e+00	0.1620	19.0	2.70%	761.0	1.63%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-1	-3.646e+00	0.1667	43.0	6.12%	2085.1	4.48%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-1	-3.627e+00	0.1669	176.0	25.04%	10209.9	21.92%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-1	-3.616e+00	0.1669	45.0	6.40%	2204.6	4.73%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-1	-3.615e+00	0.1669	48.0	6.83%	2377.6	5.10%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-1	-3.609e+00	0.1669	18.0	2.56%	717.1	1.54%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-1	-3.592e+00	0.1669	21.0	2.99%	875.1	1.88%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-3.544e+00	0.1669	16.0	2.28%	620.4	1.33%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-1	-3.442e+00	0.1820	11.0	1.56%	380.2	0.82%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-3.361e+00	0.1943	35.0	4.98%	1671.2	3.59%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-1	-3.282e+00	0.2071	8.0	1.14%	249.1	0.53%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-1	-3.281e+00	0.2071	33.0	4.69%	1569.0	3.37%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-1	-3.185e+00	0.2215	38.0	5.41%	1869.0	4.01%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-3.075e+00	0.2438	39.0	5.55%	1943.9	4.17%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-1	-3.064e+00	0.2438	14.0	1.99%	557.5	1.20%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-3.042e+00	0.2446	5.0	0.71%	129.2	0.28%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-1	-3.038e+00	0.2446	73.0	10.38%	3972.4	8.53%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-1	-3.014e+00	0.2448	33.0	4.69%	1607.1	3.45%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e-1	-2.836e+00	0.2885	5.0	0.71%	137.7	0.30%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-1	-2.824e+00	0.2885	32.0	4.55%	1578.6	3.39%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-2.709e+00	0.3188	4.0	0.57%	100.0	0.21%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-2.634e+00	0.3393	155.0	22.05%	9208.5	19.77%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-2.480e+00	0.3909	6.0	0.85%	199.7	0.43%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e-1	-2.449e+00	0.3981	7.0	1.00%	249.3	0.54%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-1	-2.310e+00	0.4516	5.0	0.71%	161.2	0.35%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-1	-2.309e+00	0.4516	29.0	4.13%	1486.9	3.19%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-2.300e+00	0.4516	1.0	0.14%	7.2	0.02%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-2.290e+00	0.4516	32.0	4.55%	1666.9	3.58%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-2.272e+00	0.4516	5.0	0.71%	163.2	0.35%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-2.245e+00	0.4537	31.0	4.41%	1615.5	3.47%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-2.223e+00	0.4583	6.0	0.85%	214.6	0.46%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.201e+00	0.4632	26.0	3.70%	1328.0	2.85%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-2.166e+00	0.4741	18.0	2.56%	870.3	1.87%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-2.131e+00	0.4855	36.0	5.12%	1935.5	4.15%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.054e+00	0.5188	20.0	2.84%	1001.8	2.15%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-2.032e+00	0.5245	22.0	3.13%	1121.8	2.41%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.994e+00	0.5387	35.0	4.98%	1903.2	4.09%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.984e+00	0.5387	51.0	7.25%	2883.1	6.19%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.954e+00	0.5488	9.0	1.28%	392.0	0.84%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.952e+00	0.5488	24.0	3.41%	1252.9	2.69%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.920e+00	0.5557	25.0	3.56%	1317.9	2.83%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.902e+00	0.5604	168.0	23.90%	10341.2	22.20%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.853e+00	0.5825	30.0	4.27%	1630.2	3.50%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.848e+00	0.5825	76.0	10.81%	4483.2	9.62%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.750e+00	0.6323	12.0	1.71%	581.5	1.25%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.725e+00	0.6421	22.0	3.13%	1174.0	2.52%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.721e+00	0.6421	24.0	3.41%	1294.7	2.78%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.655e+00	0.6753	6.0	0.85%	255.7	0.55%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.629e+00	0.6862	4.0	0.57%	151.9	0.33%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.622e+00	0.6862	13.0	1.85%	656.3	1.41%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-1.597e+00	0.6957	1.0	0.14%	15.2	0.03%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.593e+00	0.6957	33.0	4.69%	1871.6	4.02%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.576e+00	0.6967	22.0	3.13%	1201.7	2.58%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.568e+00	0.6967	41.0	5.83%	2374.9	5.10%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.515e+00	0.7275	19.0	2.70%	1031.4	2.21%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.510e+00	0.7275	4.0	0.57%	159.7	0.34%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.472e+00	0.7456	25.0	3.56%	1407.0	3.02%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-1.463e+00	0.7460	15.0	2.13%	799.9	1.72%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.448e+00	0.7507	54.0	7.68%	3228.3	6.93%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.428e+00	0.7586	81.0	11.52%	4956.7	10.64%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-1.425e+00	0.7586	2.0	0.28%	62.2	0.13%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.414e+00	0.7586	4.0	0.57%	166.3	0.36%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.403e+00	0.7586	8.0	1.14%	393.0	0.84%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.400e+00	0.7586	19.0	2.70%	1053.2	2.26%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.388e+00	0.7586	37.0	5.26%	2174.8	4.67%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.361e+00	0.7710	4.0	0.57%	170.4	0.37%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.338e+00	0.7829	11.0	1.56%	579.2	1.24%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.328e+00	0.7845	29.0	4.13%	1689.5	3.63%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.320e+00	0.7845	34.0	4.84%	2005.9	4.31%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.317e+00	0.7845	25.0	3.56%	1442.9	3.10%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.305e+00	0.7845	11.0	1.56%	584.6	1.25%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.302e+00	0.7845	43.0	6.12%	2579.7	5.54%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.302e+00	0.7845	23.0	3.27%	1321.9	2.84%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.272e+00	0.7906	5.0	0.71%	234.5	0.50%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.267e+00	0.7906	11.0	1.56%	591.0	1.27%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.233e+00	0.8100	22.0	3.13%	1275.9	2.74%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.229e+00	0.8100	4.0	0.57%	181.8	0.39%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.215e+00	0.8117	3.0	0.43%	126.2	0.27%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.165e+00	0.8476	5.0	0.71%	245.2	0.53%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.162e+00	0.8476	3.0	0.43%	130.9	0.28%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.151e+00	0.8476	4.0	0.57%	188.1	0.40%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.127e+00	0.8607	16.0	2.28%	924.7	1.98%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-1.118e+00	0.8620	155.0	22.05%	9921.2	21.30%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.077e+00	0.8918	16.0	2.28%	935.1	2.01%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.054e+00	0.9065	37.0	5.26%	2280.5	4.90%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.051e+00	0.9065	3.0	0.43%	139.4	0.30%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.027e+00	0.9177	58.0	8.25%	3647.4	7.83%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.017e+00	0.9207	2.0	0.28%	84.8	0.18%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.002e+00	0.9279	2.0	0.28%	85.9	0.18%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-9.918e-01	0.9311	5.0	0.71%	265.8	0.57%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-9.834e-01	0.9325	70.0	9.96%	4448.4	9.55%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-9.558e-01	0.9522	22.0	3.13%	1348.8	2.90%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-9.543e-01	0.9522	16.0	2.28%	964.7	2.07%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-9.466e-01	0.9522	9.0	1.28%	521.3	1.12%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-9.457e-01	0.9522	6.0	0.85%	333.4	0.72%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-9.408e-01	0.9522	3.0	0.43%	149.5	0.32%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-9.400e-01	0.9522	4.0	0.57%	210.3	0.45%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-9.254e-01	0.9522	6.0	0.85%	336.5	0.72%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-9.250e-01	0.9522	19.0	2.70%	1164.8	2.50%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-9.069e-01	0.9522	8.0	1.14%	465.6	1.00%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-8.899e-01	0.9583	58.0	8.25%	3712.7	7.97%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-8.776e-01	0.9640	29.0	4.13%	1826.6	3.92%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-8.737e-01	0.9640	62.0	8.82%	3982.1	8.55%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-8.518e-01	0.9767	32.0	4.55%	2031.7	4.36%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-8.517e-01	0.9767	15.0	2.13%	926.1	1.99%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-8.437e-01	0.9767	2.0	0.28%	97.4	0.21%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-8.433e-01	0.9767	26.0	3.70%	1643.3	3.53%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-8.419e-01	0.9767	8.0	1.14%	477.7	1.03%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-8.317e-01	0.9767	42.0	5.97%	2693.9	5.78%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-8.267e-01	0.9767	4.0	0.57%	224.2	0.48%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-8.241e-01	0.9767	5.0	0.71%	288.5	0.62%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-8.097e-01	0.9767	1.0	0.14%	39.5	0.08%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-8.093e-01	0.9767	9.0	1.28%	548.7	1.18%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-8.014e-01	0.9767	39.0	5.55%	2510.2	5.39%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-7.977e-01	0.9767	25.0	3.56%	1594.4	3.42%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-7.901e-01	0.9767	3.0	0.43%	165.7	0.36%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-7.866e-01	0.9767	2.0	0.28%	102.8	0.22%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-7.720e-01	0.9767	21.0	2.99%	1341.1	2.88%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-7.518e-01	0.9863	12.0	1.71%	757.5	1.63%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-7.434e-01	0.9891	10.0	1.42%	628.1	1.35%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-7.336e-01	0.9931	16.0	2.28%	1026.0	2.20%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-7.173e-01	1.0000	46.0	6.54%	3012.0	6.47%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-6.941e-01	1.0000	3.0	0.43%	178.0	0.38%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-6.882e-01	1.0000	11.0	1.56%	708.3	1.52%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-6.870e-01	1.0000	45.0	6.40%	2962.8	6.36%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-6.816e-01	1.0000	76.0	10.81%	5020.5	10.78%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-6.720e-01	1.0000	3.0	0.43%	180.5	0.39%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-6.626e-01	1.0000	1.0	0.14%	48.7	0.10%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-6.590e-01	1.0000	31.0	4.41%	2047.5	4.39%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-6.544e-01	1.0000	94.0	13.37%	6234.6	13.38%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-6.446e-01	1.0000	48.0	6.83%	3185.7	6.84%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-6.279e-01	1.0000	13.0	1.85%	859.9	1.85%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-6.224e-01	1.0000	33.0	4.69%	2198.4	4.72%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-5.993e-01	1.0000	10.0	1.42%	667.0	1.43%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-5.871e-01	1.0000	8.0	1.14%	534.3	1.15%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-5.843e-01	1.0000	1.0	0.14%	54.7	0.12%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-5.762e-01	1.0000	33.0	4.69%	2222.4	4.77%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-5.627e-01	1.0000	57.0	8.11%	3838.1	8.24%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-5.618e-01	1.0000	127.0	18.07%	8510.6	18.27%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-5.488e-01	1.0000	5.0	0.71%	338.0	0.73%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-5.474e-01	1.0000	15.0	2.13%	1022.1	2.19%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-5.473e-01	1.0000	43.0	6.12%	2910.8	6.25%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-5.452e-01	1.0000	2.0	0.28%	129.6	0.28%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-5.384e-01	1.0000	9.0	1.28%	616.2	1.32%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-5.370e-01	1.0000	37.0	5.26%	2513.1	5.39%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-5.369e-01	1.0000	14.0	1.99%	958.5	2.06%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-5.356e-01	1.0000	78.0	11.10%	5264.7	11.30%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-5.239e-01	1.0000	108.0	15.36%	7280.6	15.63%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-5.224e-01	1.0000	40.0	5.69%	2724.6	5.85%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-4.978e-01	1.0000	6.0	0.85%	420.7	0.90%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-4.955e-01	1.0000	23.0	3.27%	1589.1	3.41%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-4.892e-01	1.0000	12.0	1.71%	839.4	1.80%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-4.880e-01	1.0000	29.0	4.13%	2002.0	4.30%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-4.804e-01	1.0000	18.0	2.56%	1255.3	2.69%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-4.738e-01	1.0000	26.0	3.70%	1805.0	3.87%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-4.685e-01	1.0000	12.0	1.71%	847.7	1.82%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-4.618e-01	1.0000	17.0	2.42%	1195.8	2.57%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-4.509e-01	1.0000	12.0	1.71%	854.3	1.83%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-4.467e-01	1.0000	4.0	0.57%	291.1	0.62%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-4.355e-01	1.0000	33.0	4.69%	2306.3	4.95%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-4.349e-01	1.0000	7.0	1.00%	509.5	1.09%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-4.277e-01	1.0000	6.0	0.85%	440.7	0.95%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-4.141e-01	1.0000	155.0	22.05%	10549.5	22.64%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-4.109e-01	1.0000	4.0	0.57%	300.7	0.65%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-4.100e-01	1.0000	25.0	3.56%	1774.5	3.81%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-3.983e-01	1.0000	14.0	1.99%	1017.5	2.18%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-3.944e-01	1.0000	56.0	7.97%	3906.0	8.38%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-3.907e-01	1.0000	30.0	4.27%	2131.1	4.57%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-3.898e-01	1.0000	3.0	0.43%	231.9	0.50%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-3.870e-01	1.0000	10.0	1.42%	740.4	1.59%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-3.725e-01	1.0000	44.0	6.26%	3106.2	6.67%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-3.696e-01	1.0000	3.0	0.43%	236.1	0.51%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-3.664e-01	1.0000	7.0	1.00%	533.1	1.14%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.618e-01	1.0000	3.0	0.43%	238.2	0.51%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-3.322e-01	1.0000	3.0	0.43%	246.1	0.53%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-3.251e-01	1.0000	3.0	0.43%	248.4	0.53%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-3.075e-01	1.0000	1.0	0.14%	88.1	0.19%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.998e-01	1.0000	16.0	2.28%	1214.4	2.61%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-2.992e-01	1.0000	52.0	7.40%	3727.3	8.00%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-2.988e-01	1.0000	7.0	1.00%	561.8	1.21%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-2.962e-01	1.0000	18.0	2.56%	1359.5	2.92%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-2.955e-01	1.0000	26.0	3.70%	1925.5	4.13%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-2.948e-01	1.0000	57.0	8.11%	4076.6	8.75%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.878e-01	1.0000	6.0	0.85%	492.0	1.06%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.866e-01	1.0000	1.0	0.14%	92.5	0.20%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-2.849e-01	1.0000	2.0	0.28%	179.9	0.39%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-2.815e-01	1.0000	33.0	4.69%	2428.1	5.21%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-2.755e-01	1.0000	7.0	1.00%	572.8	1.23%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.736e-01	1.0000	60.0	8.53%	4308.3	9.25%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.675e-01	1.0000	71.0	10.10%	5072.8	10.89%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-2.672e-01	1.0000	2.0	0.28%	184.2	0.40%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-2.670e-01	1.0000	4.0	0.57%	346.2	0.74%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-2.669e-01	1.0000	64.0	9.10%	4592.4	9.86%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-2.647e-01	1.0000	10.0	1.42%	801.8	1.72%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-2.538e-01	1.0000	1.0	0.14%	99.8	0.21%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-2.469e-01	1.0000	11.0	1.56%	886.3	1.90%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.440e-01	1.0000	8.0	1.14%	664.5	1.43%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.438e-01	1.0000	26.0	3.70%	1971.8	4.23%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-2.370e-01	1.0000	1.0	0.14%	103.0	0.22%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-2.337e-01	1.0000	4.0	0.57%	360.7	0.77%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-2.332e-01	1.0000	3.0	0.43%	279.1	0.60%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-2.332e-01	1.0000	13.0	1.85%	1043.1	2.24%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.321e-01	1.0000	11.0	1.56%	896.3	1.92%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-2.256e-01	1.0000	8.0	1.14%	675.9	1.45%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.190e-01	1.0000	26.0	3.70%	1996.5	4.29%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.180e-01	1.0000	2.0	0.28%	200.1	0.43%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-2.112e-01	1.0000	23.0	3.27%	1789.6	3.84%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-2.063e-01	1.0000	13.0	1.85%	1064.9	2.29%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-2.022e-01	1.0000	6.0	0.85%	535.4	1.15%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-2.008e-01	1.0000	12.0	1.71%	994.7	2.14%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.977e-01	1.0000	7.0	1.00%	616.1	1.32%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-1.871e-01	1.0000	2.0	0.28%	212.4	0.46%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.847e-01	1.0000	23.0	3.27%	1818.8	3.90%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.803e-01	1.0000	7.0	1.00%	629.0	1.35%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.712e-01	1.0000	2.0	0.28%	219.2	0.47%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.667e-01	1.0000	1.0	0.14%	124.1	0.27%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.652e-01	1.0000	4.0	0.57%	396.1	0.85%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.628e-01	1.0000	26.0	3.70%	2064.0	4.43%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.595e-01	1.0000	31.0	4.41%	2429.3	5.21%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.504e-01	1.0000	32.0	4.55%	2515.8	5.40%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.466e-01	1.0000	26.0	3.70%	2086.5	4.48%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.414e-01	1.0000	7.0	1.00%	659.6	1.42%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.392e-01	1.0000	66.0	9.39%	4948.3	10.62%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.376e-01	1.0000	24.0	3.41%	1953.2	4.19%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.336e-01	1.0000	10.0	1.42%	904.8	1.94%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.267e-01	1.0000	24.0	3.41%	1970.5	4.23%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.265e-01	1.0000	19.0	2.70%	1599.8	3.43%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.210e-01	1.0000	16.0	2.28%	1381.0	2.96%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.180e-01	1.0000	34.0	4.84%	2717.8	5.83%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.179e-01	1.0000	5.0	0.71%	516.8	1.11%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.169e-01	1.0000	9.0	1.28%	844.7	1.81%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.091e-01	1.0000	17.0	2.42%	1475.5	3.17%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-1.076e-01	1.0000	3.0	0.43%	350.9	0.75%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.052e-01	1.0000	3.0	0.43%	352.9	0.76%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.034e-01	1.0000	6.0	0.85%	615.1	1.32%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-9.375e-02	1.0000	7.0	1.00%	711.0	1.53%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-9.288e-02	1.0000	27.0	3.84%	2256.6	4.84%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-9.104e-02	1.0000	5.0	0.71%	544.9	1.17%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-8.932e-02	1.0000	23.0	3.27%	1965.1	4.22%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-8.853e-02	1.0000	5.0	0.71%	547.7	1.18%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-8.811e-02	1.0000	11.0	1.56%	1043.2	2.24%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-8.667e-02	1.0000	15.0	2.13%	1360.3	2.92%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-8.493e-02	1.0000	4.0	0.57%	463.2	0.99%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-8.316e-02	1.0000	49.0	6.97%	3888.5	8.35%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-8.312e-02	1.0000	26.0	3.70%	2205.0	4.73%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-8.107e-02	1.0000	67.0	9.53%	5182.2	11.12%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-8.089e-02	1.0000	1.0	0.14%	169.4	0.36%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-7.587e-02	1.0000	2.0	0.28%	283.9	0.61%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-7.420e-02	1.0000	16.0	2.28%	1463.2	3.14%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-7.336e-02	1.0000	49.0	6.97%	3920.3	8.41%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-6.588e-02	1.0000	13.0	1.85%	1245.1	2.67%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-6.079e-02	1.0000	3.0	0.43%	401.7	0.86%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-6.055e-02	1.0000	58.0	8.25%	4619.8	9.92%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-5.822e-02	1.0000	6.0	0.85%	680.2	1.46%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-5.819e-02	1.0000	1.0	0.14%	191.0	0.41%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-5.815e-02	1.0000	18.0	2.56%	1659.7	3.56%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-5.725e-02	1.0000	5.0	0.71%	593.1	1.27%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-5.697e-02	1.0000	4.0	0.57%	502.4	1.08%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-4.577e-02	1.0000	4.0	0.57%	523.5	1.12%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-4.540e-02	1.0000	46.0	6.54%	3817.4	8.19%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-3.758e-02	1.0000	9.0	1.28%	991.6	2.13%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-3.421e-02	1.0000	65.0	9.25%	5272.0	11.32%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-3.230e-02	1.0000	1.0	0.14%	228.1	0.49%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-3.218e-02	1.0000	9.0	1.28%	1010.5	2.17%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-2.914e-02	1.0000	9.0	1.28%	1022.5	2.19%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-2.694e-02	1.0000	10.0	1.42%	1118.1	2.40%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-2.188e-02	1.0000	149.0	21.19%	11347.2	24.36%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-2.065e-02	1.0000	8.0	1.14%	974.6	2.09%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.968e-02	1.0000	64.0	9.10%	5334.8	11.45%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.756e-02	1.0000	3.0	0.43%	508.9	1.09%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.695e-02	1.0000	1.0	0.14%	270.9	0.58%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.486e-02	1.0000	3.0	0.43%	522.4	1.12%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.445e-02	1.0000	81.0	11.52%	6648.7	14.27%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-7.696e-03	1.0000	27.0	3.84%	2701.9	5.80%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-7.428e-03	1.0000	1.0	0.14%	324.4	0.70%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-2.705e-03	1.0000	22.0	3.13%	2443.5	5.24%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-2.312e-03	1.0000	42.0	5.97%	4091.2	8.78%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-2.141e-03	1.0000	169.0	24.04%	13403.6	28.77%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.031e-03	1.0000	10.0	1.42%	1413.8	3.03%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.389e-03	1.0000	1.0	0.14%	434.9	0.93%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.220e-03	1.0000	49.0	6.97%	4749.7	10.20%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-6.820e-04	1.0000	52.0	7.40%	5082.1	10.91%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-6.480e-04	1.0000	42.0	5.97%	4296.8	9.22%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.920e-04	1.0000	43.0	6.12%	4560.7	9.79%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-8.600e-05	1.0000	33.0	4.69%	3839.4	8.24%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-5.300e-05	1.0000	2.0	0.28%	818.2	1.76%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	0.000e+00	1.0000	0.0	0.00%	256.6	0.55%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	191.8	0.41%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	33.0	0.07%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	49.7	0.11%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	22.2	0.05%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	10.3	0.02%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	67.7	0.15%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	103.7	0.22%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	89.3	0.19%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	34.1	0.07%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	10.2	0.02%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	33.8	0.07%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	28.8	0.06%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	120.5	0.26%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	11.6	0.02%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	39.6	0.08%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	0.000e+00	1.0000	0.0	0.00%	179.9	0.39%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	201.9	0.43%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	25.0	0.05%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	2.4	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	11.2	0.02%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	38.9	0.08%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	100.9	0.22%