Information for 6-RTACTTGWAAAGAAAA (Motif 9)

C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T A G C T A G T C C G A T A C G T A C G T G C T A A G T C C T G A C T G A T A C G A C G T C G T A G A C T
p-value:1e-13
log p-value:-3.178e+01
Information Content per bp:1.804
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 16.3bp
Average Position of motif in Background65.8 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:RTACTTGWAAAGAAAA----
---GTTAAAAAAAAAAATTA
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RTACTTGWAAAGAAAA
-TACTGGAAAAAAAA-
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RTACTTGWAAAGAAAA
-BAGTCATANTGAAAG
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A
A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RTACTTGWAAAGAAAA
AATATTAATAAAGA---
 A C G T C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RTACTTGWAAAGAAAA----
---GTTCAAAAAAAAAATTC
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RTACTTGWAAAGAAAA--
WNAGTCADAVTGAAACTN
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RTACTTGWAAAGAAAA--
-AAAAAGTAAACAAAGAC
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:RTACTTGWAAAGAAAA--
------GAAAMTGAAACT
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RTACTTGWAAAGAAAA--
-TAAATGTAAACAAAGGT
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RTACTTGWAAAGAAAA--
-AAAATGTAAACAAACAG
 C T G A A C G T G T C A A G T C A G C T A G C T C T A G C G A T C G T A C G T A C G T A C T A G C T G A C G T A C G T A C G T A A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G