Information for 6-CARTGWGTAMTTK (Motif 11)

A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G
Reverse Opposite:
G T A C C G T A C G T A A C G T A C G T C G T A A G T C G C A T A G T C C G T A A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.026e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.6 +/- 28.0bp
Average Position of motif in Background31.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CARTGWGTAMTTK----
-TATTGGTAATTACCTT
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

DLX6/MA0882.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CARTGWGTAMTTK-
------NTAATTGN
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CARTGWGTAMTTK-
ACCGTGACTAATTNN
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Dlx4/MA0881.1/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CARTGWGTAMTTK-
------NTAATTGN
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CARTGWGTAMTTK-
------NTAATTGG
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CARTGWGTAMTTK-
------NTAATTGG
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

Dlx3/MA0880.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CARTGWGTAMTTK-
------NTAATTGN
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CARTGWGTAMTTK
--ATGAGTCAT--
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CARTGWGTAMTTK-
------NTAATTGN
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

Dlx2/MA0885.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CARTGWGTAMTTK-
------NTAATTGN
 A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T G T C A G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C