Information for 4-GCAAGCCCTG (Motif 9)

A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G
Reverse Opposite:
G T A C C G T A T A C G A C T G A T C G T G A C A G C T C G A T T C A G A T G C
p-value:1e-12
log p-value:-2.988e+01
Information Content per bp:1.711
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.92%
Number of Background Sequences with motif1134.3
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets52.8 +/- 22.9bp
Average Position of motif in Background50.5 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCAAGCCCTG
-CNAGGCCT-
 A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCAAGCCCTG
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAAGCCCTG
-CTAGGCCT-
 A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCAAGCCCTG
AGATGCAATCCC--
 A C G T A C G T A C G T A C G T A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAAGCCCTG----
ACATGCCCGGGCAT
 A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAAGCCCTG-----
CAAAGGCGTGGCCAG
 A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G A C G T A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Klf12/MA0742.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCAAGCCCTG---
GACCACGCCCTTATT
 A C G T A C G T A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCCCTG
NTCAAGGTCA-
 A C G T A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCAAGCCCTG
AAGGCAAGTGT--
 A C G T A C G T A C G T A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGCCCTG---
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A T C G A G T C G C T A T C G A A C T G T A G C G T A C A T G C C G A T C A T G A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C