Information for 15-AAACGTATGCATA (Motif 36)

C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T A C G T A C G T
p-value:1e-3
log p-value:-9.027e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 2.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AAACGTATGCATA-----
-AAAATATGCATAATAAA
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:AAACGTATGCATA---
------ATGMATATDC
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AAACGTATGCATA---
------ATGAATATTC
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAACGTATGCATA
AYATGYATATGCATR
 A C G T A C G T C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAACGTATGCATA--
GGGCCGTGTGCAAAAA
 A C G T C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAACGTATGCATA
AAACATATGTTT-
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAACGTATGCATA-
-----TATGCAAAT
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAACGTATGCATA-
-----TATGCAAAT
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAACGTATGCATA-----
--TTGTATGCAAATTAGA
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAACGTATGCATA-----
--TTGTATGCAAATTAGA
 C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A