Information for 13-GKTTTCTCATGCY (Motif 33)

A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C C G T A A C G T A C T G C G T A A C T G C T G A C G T A G T C A G T C A A G T C
p-value:1e-7
log p-value:-1.673e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 23.7bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GKTTTCTCATGCY
-HTTTCCCASG--
 A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GKTTTCTCATGCY---
-CTTTGTTATGCAAAT
 A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GKTTTCTCATGCY-
NNNTTTNTAATACNG
 A C G T A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GKTTTCTCATGCY-
AGNGTTCTAATGANN
 A C G T A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GKTTTCTCATGCY
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GKTTTCTCATGCY---
-CATTGTTATGCAAAT
 A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GKTTTCTCATGCY
NNAATTAGTCACGGT
 A C G T A C G T A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GKTTTCTCATGCY
-----GTCATN--
 A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GKTTTCTCATGCY------
----TCNCCTGCTGNGNNN
 A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GKTTTCTCATGCY
ASTTTCASTTYC-
 A C T G A C G T A C G T A C G T A G C T G T A C A C G T A G T C C G T A A C G T A C T G A G T C A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T