Information for 9-TGTGTGTGCATGCACA (Motif 13)

A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
Reverse Opposite:
A G C T C A T G A C G T A C T G G T A C C T G A A G C T A C T G G T A C C G T A A G T C G T C A A T G C G C T A A G T C C T G A
p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.743
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.2 +/- 20.0bp
Average Position of motif in Background47.4 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGTGTGTGCATGCACA
---GTGCGCATGCGC-
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
A C G T A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGTGTGTGCATGCACA
---CTGCGCATGCGC-
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TGTGTGTGCATGCACA
-----GCGCCTGCGCA
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTGTGTGCATGCACA----
---NTNTATGTGCACATNNN
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTGCATGCACA
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGTGTGTGCATGCACA
-----TTGCGTGCVA-
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGTGTGTGCATGCACA
---CTGTTCCTGG---
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TGTGTGTGCATGCACA--
---------ATGCCCACC
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGTGTGTGCATGCACA
------TGCGTG----
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGTGTGTGCATGCACA----
-------ATATGCAAATNNN
 A G C T C T A G C G A T A T C G A C G T C T A G G A C T A C T G A G T C T C G A A G C T A C T G A G T C G T C A G A T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A