Information for 3-TSCMACTTGCCCR (Motif 12)

A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A
Reverse Opposite:
G A C T C T A G A C T G A C T G A G T C C G T A C G T A A C T G G A C T A C G T A C T G A T C G C G T A
p-value:1e-12
log p-value:-2.810e+01
Information Content per bp:1.806
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.2 +/- 25.3bp
Average Position of motif in Background66.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TSCMACTTGCCCR
--NNACTTGCCTT
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.67
Offset:6
Orientation:forward strand
Alignment:TSCMACTTGCCCR--
------ATGCCCACC
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TSCMACTTGCCCR--
------CTGCCCGCA
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TSCMACTTGCCCR-----
----ACATGCCCGGGCAT
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TSCMACTTGCCCR-----
--GGGTGTGCCCAAAAGG
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TSCMACTTGCCCR----
-------TGCCCAGNHW
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TSCMACTTGCCCR--
------ATGCCAACC
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TSCMACTTGCCCR-
TGACCTTTGCCCTA
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TSCMACTTGCCCR
SNGCACCTGCHS-
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TSCMACTTGCCCR
CGGCACGTGCCA-
 A C G T A T G C A G T C G T C A C G T A A G T C G C A T A C G T A C T G A G T C A G T C A G T C C T G A
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T