Information for 6-AACAAGTCAC (Motif 11)

C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C
Reverse Opposite:
A C T G A C G T C A T G C G T A A T G C A G C T A C G T C T A G G C A T G C A T
p-value:1e-12
log p-value:-2.845e+01
Information Content per bp:1.839
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif80.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets57.1 +/- 22.1bp
Average Position of motif in Background53.1 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AACAAGTCAC
-AAAAGTCAA
 C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AACAAGTCAC--
----AGTCACGC
 C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AACAAGTCAC--
ATAAACAATTAAACA
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AACAAGTCAC-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACAAGTCAC---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACAAGTCAC-
GTCATGTGACC
 C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

USF1/MA0093.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACAAGTCAC-
GCCACGTGACC
 C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AACAAGTCAC
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACAAGTCAC--
GTGCCACGTCATCA
 A C G T A C G T C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACAAGTCAC-
AATGCCACGTCATC
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T G A A T C G A C G T G A T C G T C A A G T C A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C