Information for 9-CAGACGTGYC (Motif 8)

A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
Reverse Opposite:
A T C G C T A G A G T C G T C A A G T C A C T G A G C T G T A C C G A T A T C G
p-value:1e-11
log p-value:-2.623e+01
Information Content per bp:1.728
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif167.4
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets53.4 +/- 25.9bp
Average Position of motif in Background53.1 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-2.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CAGACGTGYC
-RTACGTGC-
 A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CAGACGTGYC
-GGACGTGC-
 A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CAGACGTGYC
--TACGTGCV
 A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CAGACGTGYC
GGGTACGTGC-
 A C G T A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

XBP1/MA0844.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAGACGTGYC---
GATGACGTGGCANT
 A C G T A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C A C G T A C G T A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CAGACGTGYC
GACACGTGCC
 A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CAGACGTGYC
GACACGTGCC
 A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGACGTGYC
CCAGACRSVB-
 A C G T A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGACGTGYC
NNCGCGTGNN
 A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

CREB3/MA0638.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGACGTGYC--
NGATGACGTGGCAN
 A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C T G A C G T A C T G G A T C T A G C A C G T A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C