Information for 2-GDGCAAGCCB (Motif 2)

T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
Reverse Opposite:
T G C A C T A G C T A G A G T C A G C T A C G T A T C G G A T C G A C T A G T C
p-value:1e-47
log p-value:-1.102e+02
Information Content per bp:1.667
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif13.10%
Number of Background Sequences with motif847.7
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets52.8 +/- 21.2bp
Average Position of motif in Background51.0 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GDGCAAGCCB
---CAAGCTT
 T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GDGCAAGCCB
AAGGCAAGTGT
 A C G T T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GDGCAAGCCB
--GCACGTAY
 T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GDGCAAGCCB---------
NRRRCAWGTCCDGRCATGYY
 A C G T T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GDGCAAGCCB
TGCGCAGGCGC
 A C G T T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GDGCAAGCCB
--GCACGTNC
 T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GDGCAAGCCB
-AACAGGTGT
 T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GDGCAAGCCB---------
NNNGCATGTCNNGACATGCN
 A C G T T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GDGCAAGCCB-
AGGTCAAGGTCA
 A C G T T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GDGCAAGCCB
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T T C A G C T G A C T A G T A G C C G T A C T G A A C T G A G T C A G T C A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T