Information for 8-GACCCTGVCCTGACTA (Motif 17)

C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A C T A G C G A T G T A C C G T A A C T G A T C G A C G T A G T C C T G A C T A G A C T G A C T G A C G T A G T C
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.760
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 18.9bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGVCCTGACTA
TGACCTTGACCT-----
 A C G T C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGVCCTGACTA
TGACCTTGACCT-----
 A C G T C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GACCCTGVCCTGACTA
--------GCTGTCAA
 C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GACCCTGVCCTGACTA
--------GCTGTG--
 C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GACCCTGVCCTGACTA---
---AAAGACCTGTCAATAC
 C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GACCCTGVCCTGACTA-
-------VGCTGWCAVB
 C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GACCCTGVCCTGACTA
-----TGACCTYA---
 C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GACCCTGVCCTGACTA
---CCTCACCTG----
 C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GACCCTGVCCTGACTA---
---AAAGACCTGTCAATCC
 C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

RARA(var.2)/MA0730.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGVCCTGACTA
TGACCTTTGCATGACCT
 A C G T C T A G C G T A G T A C G T A C A G T C A G C T C T A G T C G A A T G C A G T C A C G T A C T G C G T A A G T C C G A T C G T A
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T