Information for 6-AAGCCRWCTGRKG (Motif 12)

C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C A T G C C G T A A C T G C G T A A G C T A C T G C T A G A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.566e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 14.5bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AAGCCRWCTGRKG
--GCCATCTGTT-
 C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGCCRWCTGRKG
--ACCATCTGTT-
 C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCRWCTGRKG
TAAGGCGTCTTG--
 A C G T C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGCCRWCTGRKG
--RCCATMTGTT-
 C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGCCRWCTGRKG--
CCNNACCATCTGGCCTN
 A C G T A C G T C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGCCRWCTGRKG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAGCCRWCTGRKG-
--GCCAGCTGBTNB
 C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAGCCRWCTGRKG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGCCRWCTGRKG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGCCRWCTGRKG-
--NVCAGCTGBBNN
 C G T A G T C A A C T G A G T C A G T C C T G A C G A T A G T C A C G T A T C G C T A G A C G T A C T G A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C