Information for 5-GGCCGGAACTGCCCTC (Motif 5)

T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C
Reverse Opposite:
A C T G C T G A A T C G A T C G A C T G A T G C C G T A A C T G A C G T A G C T A G T C A G T C T C A G C T A G A G T C A G T C
p-value:1e-14
log p-value:-3.364e+01
Information Content per bp:1.702
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.0 +/- 17.3bp
Average Position of motif in Background56.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GGCCGGAACTGCCCTC-
--------CTGCCCGCA
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCCGGAACTGCCCTC
----GGCCCCGCCCCC
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCCGGAACTGCCCTC-
---NAGCCCCGCCCCCN
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCCGGAACTGCCCTC
-CCAGGAACAG-----
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:GGCCGGAACTGCCCTC-
---------TGACCTYA
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCCGGAACTGCCCTC
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGCCGGAACTGCCCTC
----GGAAATCCCC--
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGCCGGAACTGCCCTC--
--------CTGACCTTTG
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GGCCGGAACTGCCCTC-
---------TGACCYCT
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGCCGGAACTGCCCTC---
----AGAAATGACTTCCCT
 T A C G A C T G A G T C A G T C C T A G A C T G T C G A T G C A A G T C C G A T A T C G G T A C A T G C A T G C A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T