Information for 23-TGCCTGCAGATCA (Motif 35)

A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A
Reverse Opposite:
A C G T A T C G C G T A A G C T G T A C A C G T A C T G A G T C G C T A A C T G A T C G G T A C C G T A
p-value:1e-6
log p-value:-1.466e+01
Information Content per bp:1.766
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif74.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.5 +/- 29.8bp
Average Position of motif in Background53.3 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGCCTGCAGATCA-
------AAGGTCAC
 A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCTGCAGATCA
CTGCCCGCA-----
 A C G T A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGCCTGCAGATCA-
----TCAAGGTCAT
 A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCCTGCAGATCA-
----TCAAGGTCAN
 A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCAGATCA-
TTTCCTGGAAAGNNN
 A C G T A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TGCCTGCAGATCA
-------AGGTCA
 A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGCCTGCAGATCA
GGGTTACTANAGGTCA
 A C G T A C G T A C G T A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCCTGCAGATCA
TTGCCAAG------
 A C G T A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCCTGCAGATCA
-GSCTGTCACTCA
 A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCAGATCA
GTACCCGCATN---
 A C G T A C G T A C T G T A G C A G T C C G A T A C T G T G A C C G T A A C T G T C G A A C G T A T G C G T C A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T