Information for 14-GCCDGCYCTG (Motif 34)

T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G
Reverse Opposite:
G T A C C G T A A T C G C T G A T A C G T G A C G C T A C A T G A T C G A T G C
p-value:1e-6
log p-value:-1.515e+01
Information Content per bp:1.574
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif6.13%
Number of Background Sequences with motif1182.4
Percentage of Background Sequences with motif2.60%
Average Position of motif in Targets43.4 +/- 27.8bp
Average Position of motif in Background49.2 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GCCDGCYCTG--
------GCTGTG
 T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCCDGCYCTG
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCDGCYCTG
-CCTCACCTG
 T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCDGCYCTG-
-VBSYGTCTGG
 T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCCDGCYCTG----
----GGTCTGGCAT
 T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCDGCYCTG
-CNAGGCCT-
 T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCDGCYCTG---
GGGGCTYGKCTGGGA
 A C G T A C G T T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G A C G T A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCDGCYCTG---
ATCCCCGCCCCTAAAA
 A C G T A C G T A C G T T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCDGCYCTG
CCCCCTGCTGTG
 A C G T A C G T T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCCDGCYCTG---
---TGCCCAGNHW
 T A C G T A G C G T A C C G A T A C T G A T G C G A C T T A G C G C A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A