Information for 13-CACCTTGTCAGTGTAA (Motif 31)

A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
Reverse Opposite:
A C G T A C G T G C T A A T G C C G T A T A G C A C G T A T C G C G T A T G A C C G T A C T G A A C T G A C T G A C G T C T A G
p-value:1e-7
log p-value:-1.781e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.6 +/- 20.2bp
Average Position of motif in Background55.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CACCTTGTCAGTGTAA
----YTGWCADY----
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACCTTGTCAGTGTAA
AACAATAACATTGTT-
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACCTTGTCAGTGTAA-
-NNNNTGCCAGTGATTG
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A A C G T
A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACCTTGTCAGTGTAA
AACAATTTCAGTGTT-
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACCTTGTCAGTGTAA
---VBTGWCAGCB---
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACCTTGTCAGTGTAA
NTNTTCTTATCAGTNTN-
 A C G T A C G T A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CACCTTGTCAGTGTAA
---SCTGTCAVTCAV-
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CACCTTGTCAGTGTAA
----NTGTCAN-----
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CACCTTGTCAGTGTAA
---NCTGTCAATCAN-
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CACCTTGTCAGTGTAA
---CCTGTCAA-----
 A G T C C G T A G T A C G T A C A G C T A C G T A C T G C G A T A T G C C G T A A C T G A C G T A T C G C G A T T C G A G T C A
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T