Information for 20-TTGCACATAATTT (Motif 30)

A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T
Reverse Opposite:
T C G A C G T A C G T A A C G T A C G T G T C A A C G T A C T G A C G T A C T G A G T C C G T A C G T A
p-value:1e-8
log p-value:-1.867e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 23.4bp
Average Position of motif in Background83.9 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTGCACATAATTT-
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTGCACATAATTT
CAGATGTGCACATACGT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTGCACATAATTT
TACATGTGCACATAAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTGCACATAATTT----
--TATCATAATTAAGGA
 A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGCACATAATTT
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGCACATAATTT
ATTTGCATACAATGG
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGCACATAATTT------
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTGCACATAATTT--
-----NNTAATTANN
 A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGCACATAATTT
GGGATTGCATNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGCACATAATTT
ATTTGCATAT-----
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A G C T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T