Information for 10-CAGGCCTGTGCTT (Motif 19)

A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T
Reverse Opposite:
C T G A C T G A C A T G A T G C C G T A A G T C C G T A T C A G C A T G A G T C A G T C A C G T C T A G
p-value:1e-10
log p-value:-2.364e+01
Information Content per bp:1.769
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif63.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets45.2 +/- 24.0bp
Average Position of motif in Background47.4 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAGGCCTGTGCTT-
----GCTGTGGTTT
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGGCCTGTGCTT-
---GTCTGTGGTTT
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CAGGCCTGTGCTT--
-----CTGTGGTTTN
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCTGTGCTT
CNAGGCCT------
 A C G T A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGGCCTGTGCTT--
-----CTGTTCCTGG
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGGCCTGTGCTT-
----NNTGTGGTTT
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGGCCTGTGCTT--
---NNHTGTGGTTWN
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTGTGCTT-
CAGGCCNNGGCCNN
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAGGCCTGTGCTT
----GCTGTG---
 A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCTGTGCTT
CTAGGCCT------
 A C G T A G T C C G T A C T A G C T A G G A T C A G T C C G A T C T A G A C G T A T C G G A T C A G C T A G C T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T